How do I Make Roblox Clouds Compatible With Pulsarnova's 3D Atmosphere?

When putting clouds with Pulsarnova’s 3D atmosphere, they do not show up. Setting the atmosphere to be transparent doesn’t fix this issue either, so if anyone can help me, it would be much appreciated.

4 days later…

You would have to probably make a full cloud system yourself or make a 3D atmosphere system yourself.